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12 Jun 2022

Introduction of Oxford Biochemistry

Biochemistry at Oxford

(New biochemistry building is one of the most modern and fancy university departments in Oxford. But it’s a shame that the first 3 years are mostly spent not here but in the old, not so modern anatomy and zoology department lecture theaters.)

 

My Experience

“One of the easier degrees to be admitted to Oxford with but one of the hard ones to graduate with high marks.”

 

During the orientation week, I received all the books I would need for the next 4 years (rented) and was shocked by 1) the size of text books and 2) the number. Many of them were very heavy one of which is Biochemistry by Stryer - read by some of high school students during application period.

 

My first year was very well balanced between studies and life outside studies. The second year was slightly skewed to spending more time outside studies because biochemists had no second year exams! (In Oxford, some courses do not have second year exams, e.g. PPE, Materials Sciences). Naturally, second year is often regarded as the best year of university life for the biochemists especially with the perfect weathered and stress-free summer in the beautiful city.

 

But, I had to pay the price of having a very challenging 3rd year exam that is based on two years worth of academic studies. In fact towards the end of the 2nd year term as my friends were finishing exams, I already started to feel the pressure.

 

Biochemistry 3rd year exam is composed over six 3 hour papers occurring over 7 days with a day break in the middle. The first five are essay based where we have to write out 3 essays in 3 hours - that’s right biochemistry is heavily essay based degree. The whole challenge is to memorize an immense amount of science and unleashing them within what feels like not enough time. Sometimes there some who feel they are not ready for the exams and take a year off a few weeks before and in extreme cases, a day before!


 

Typical Week in Biochemistry

1-2 tutorials

2 lectures a day

3-5 hours of lab on Fridays

 

Most of tutorial works are reading up on journals with reference to textbooks in answer to essay questions. I personally found journal readings very challenging. I very much found it difficult to get used to obtaining information from science reports than from textbooks with all the info neatly organised. So although it is generally regarded that one tutorial essay requires 8 hours, I spent more. Sometimes there were some journals given as tutorial work where those journals were in fact published my tutors!

 

Officially, speaking, although tutorials are compulsory, lectures are not. In fact, all the lecture notes are uploaded to the biochemistry website. But most biochemists choose to attend the lectures because the amount of contents covered are a lot and with the fast pace of lectures, we can cover a lot in short amount of time. And also because of free prints!

 

I personally didn’t very much enjoy the 1st-3rd year practicals except a few occasional ones like PCR and cloning. I much preferred tissue culturing, viral transfection sort during my 4th year project.

 

 

Course

1st year

Molecular Cell Biology

Biological Chemistry

Biophysical Chemistry

Organic Chemistry

Maths & Statistics

 

Actually, my two favourite courses were organic chemistry and biophysical chemistry. A big shame because none of them were studied beyond the 1st year!

 

We had the same lectures on organic chemistry as with the chemists. My organic chemistry tutors were also chemistry lecturers.

 

2nd & 3rd year

4 courses with 10 topics each

Macromolecular Structure and FunctionBioenergetics and MetabolismGenetics and Molecular BiologyCell Biology and the integration of function

Crystallography

 

Enzymes

 

Membrane Proteins

 

Metal Ions

 

Nucleic Acid/ Protein Interaction

 

Physical Methods in protein structure determination

 

Protein Purification & Characterisation

 

Biophysical techniques

 

Protein Structure, Folding Mechanism

 

Integrated Structural Biology

 

Structure Based Drug Design

Bioenergetics

 

Plant Metabolism

 

Human Metabolism

 

Advanced Human Metabolism

 

Muscle Contraction

 

Prokaryotic metabolism, physiology and regulation

 

Functional Glycobiology

 

Molecular Motors

 

Nitric Oxide & Calcium

 

Structure Function relations in photochemical and respiratory systems

DNA structure & replication

 

Eukaryotic DNA replication

 

Genetic Toolbox

 

Transcription 1

 

Transcription 2

 

RNA Biology: translation

 

Molecular Biology Toolbox

 

Chromosome Biology

 

Genomics

Viruses

Macromolecule target & transport

 

Principles of Cell Signalling

 

Apoptosis

Cell growth & division

 

Immunology

 

Photoreception in Mammals

 

Protein Targeting

 

Cell Matrix

 

http://www.bioch.ox.ac.uk/aspsite/index.asp?sectionid=about_und_course

 

Most biochemistry students will have topics that he/she really love but also don’t like. For me, my favourite ones were human and plant metabolisms while I didn’t much enjoy proteins. Fortunately, we are not examined on every module we are taught and can choose ourselves!

 

4th year

4th year is a year where you conduct a lab project based on which you write your own thesis. This lab research can be done in the research area of your choice. In fact, lab research can be done abroad either in the US (Princeton) or Europe. I personally went to Princeton with 2 other biochemists in my year. The lab I was in was looking at breast cancer metastasis to lungs and bone.

 

“My supervisor was investigating two proteins that had a potential role in the metastasis and my lab project was to confirm the hypothesis through in vitro metastatic functional assaying of overexpressed and knockdown samples.”

 

After submission of thesis, biochemists also need to sit two exams that are chosen from:

Molecular Immunology*

Plant Molecular Biology

Neuropharmacology

Membrane Transport

Glycobiology

Human Disease*

Bionanotechnology

Systems Biology

Signalling to the Nucleus

 

I chose biochemistry at the beginning with the hope to study some physiology/ medicine related sciences and immunology and human diseases were very enjoyable courses to study.

 

After Oxford Biochemistry

http://www.bioch.ox.ac.uk/aspsite/index.asp?pageid=419

According to the official department site, about half of the graduates remain in the academia pursuing further studies and the other half that starts career work in the various industries that include:

 

Research (Pharmaceuticals)

Consulting (General, bio-pharma)

Education

ETC

 

Most of my friends seem to have ended up in consulting.